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A novel TP53-KPNA3 translocation defines a de novo treatment-resistant clone in osteosarcoma

Authors
 Kenneth S. Chen  ;  Woo Sun Kwon  ;  Jiwoong Kim  ;  Su Jin Heo  ;  Hyo Song Kim  ;  Hyo Ki Kim  ;  Soo Hee Kim  ;  Won Suk Lee  ;  Hyun Cheol Chung  ;  Sun Young Rha  ;  Tae Hyun Hwang 
Citation
 Cold Spring Harbor Molecular Case Studies, Vol.2(5) : a000992, 2016 
Journal Title
 Cold Spring Harbor Molecular Case Studies 
Issue Date
2016
Abstract
Osteosarcoma is the most common primary bone cancer. It can be cured by aggressive surgery and chemotherapy, but outcomes for metastatic or chemoresistant disease remain dismal. Cancer sequencing studies have shown that the p53 pathway is dysregulated in nearly every case, often by translocation; however, no studies of osteosarcoma evolution or intratumor heterogeneity have been done to date. We studied a patient with chemoresistant, metastatic disease over the course of 3 years. We performed exome sequencing on germline DNA and DNA collected from tumor at three separate time points. We compared variant calls and variant allele frequencies between different samples. We identified subclonal mutations in several different genes in the primary tumor sample and found that one particular subclone dominated subsequent tumor samples at relapse. This clone was marked by a novel TP53-KPNA3 translocation and loss of the opposite-strand wild-type TP53 allele. Future research must focus on the functional significance of such clones and strategies to eliminate them.
Files in This Item:
T201606536.pdf Download
DOI
10.1101/mcs.a000992
Appears in Collections:
1. College of Medicine (의과대학) > Yonsei Biomedical Research Center (연세의생명연구원) > 1. Journal Papers
1. College of Medicine (의과대학) > Dept. of Internal Medicine (내과학교실) > 1. Journal Papers
Yonsei Authors
Kwon, Woo Sun(권우선)
Kim, Hyo Song(김효송) ORCID logo https://orcid.org/0000-0002-0625-9828
Rha, Sun Young(라선영) ORCID logo https://orcid.org/0000-0002-2512-4531
Chung, Hyun Cheol(정현철) ORCID logo https://orcid.org/0000-0002-0920-9471
Heo, Su Jin(허수진) ORCID logo https://orcid.org/0000-0002-0615-5869
URI
https://ir.ymlib.yonsei.ac.kr/handle/22282913/155790
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