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Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes

Authors
 Kweon, Sunjun  ;  Kim, Junu  ;  Kim, Jiyoun  ;  Im, Sujeong  ;  Cho, Eunbyeol  ;  Bae, Seongsu  ;  Oh, Jungwoo  ;  Lee, Gyubok  ;  Moon, Jong Hak  ;  You, Seng Chan  ;  Baek, Seungjin  ;  Han, Chang Hoon 
Citation
 Proceedings of the Annual Meeting of the Association for Computational Linguistics, Vol.2024 : 5148-5168, 2024-08 
Journal Title
 Proceedings of the Annual Meeting of the Association for Computational Linguistics 
Issue Date
2024-08
Abstract
The development of large language models tailored for handling patients' clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synthetic large-scale clinical notes using publicly available case reports extracted from biomedical literature. We then use these synthetic notes to train our specialized clinical large language model, Asclepius. While Asclepius is trained on synthetic data, we assess its potential performance in real-world applications by evaluating it using real clinical notes. We benchmark Asclepius against several other large language models, including GPT-3.5-turbo and other open-source alternatives. To further validate our approach using synthetic notes, we also compare Asclepius with its variants trained on real clinical notes. Our findings convincingly demonstrate that synthetic clinical notes can serve as viable substitutes for real ones when constructing high-performing clinical language models. This conclusion is supported by detailed evaluations conducted by both GPT-4 and medical professionals. All resources-including weights, codes, and data-used in the development of Asclepius will be made publicly accessible for future research. © 2024 Association for Computational Linguistics.
Full Text
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Files in This Item:
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Appears in Collections:
1. College of Medicine (의과대학) > Dept. of Biomedical Systems Informatics (의생명시스템정보학교실) > 1. Journal Papers
Yonsei Authors
You, Seng Chan(유승찬) ORCID logo https://orcid.org/0000-0002-5052-6399
URI
https://ir.ymlib.yonsei.ac.kr/handle/22282913/202299
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