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OpenKBP-Opt: an international and reproducible evaluation of 76 knowledge-based planning pipelines

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dc.date.accessioned2023-03-21T07:17:57Z-
dc.date.available2023-03-21T07:17:57Z-
dc.date.issued2022-09-
dc.identifier.issn0031-9155-
dc.identifier.urihttps://ir.ymlib.yonsei.ac.kr/handle/22282913/193298-
dc.description.abstractObjective.To establish an open framework for developing plan optimization models for knowledge-based planning (KBP).Approach.Our framework includes radiotherapy treatment data (i.e. reference plans) for 100 patients with head-and-neck cancer who were treated with intensity-modulated radiotherapy. That data also includes high-quality dose predictions from 19 KBP models that were developed by different research groups using out-of-sample data during the OpenKBP Grand Challenge. The dose predictions were input to four fluence-based dose mimicking models to form 76 unique KBP pipelines that generated 7600 plans (76 pipelines × 100 patients). The predictions and KBP-generated plans were compared to the reference plans via: the dose score, which is the average mean absolute voxel-by-voxel difference in dose; the deviation in dose-volume histogram (DVH) points; and the frequency of clinical planning criteria satisfaction. We also performed a theoretical investigation to justify our dose mimicking models.Main results.The range in rank order correlation of the dose score between predictions and their KBP pipelines was 0.50-0.62, which indicates that the quality of the predictions was generally positively correlated with the quality of the plans. Additionally, compared to the input predictions, the KBP-generated plans performed significantly better (P< 0.05; one-sided Wilcoxon test) on 18 of 23 DVH points. Similarly, each optimization model generated plans that satisfied a higher percentage of criteria than the reference plans, which satisfied 3.5% more criteria than the set of all dose predictions. Lastly, our theoretical investigation demonstrated that the dose mimicking models generated plans that are also optimal for an inverse planning model.Significance.This was the largest international effort to date for evaluating the combination of KBP prediction and optimization models. We found that the best performing models significantly outperformed the reference dose and dose predictions. In the interest of reproducibility, our data and code is freely available.-
dc.description.statementOfResponsibilityrestriction-
dc.languageEnglish-
dc.publisherIOP Publishing-
dc.relation.isPartOfPHYSICS IN MEDICINE AND BIOLOGY-
dc.rightsCC BY-NC-ND 2.0 KR-
dc.subject.MESHHumans-
dc.subject.MESHKnowledge Bases-
dc.subject.MESHRadiotherapy Dosage-
dc.subject.MESHRadiotherapy Planning, Computer-Assisted* / methods Radiotherapy, Intensity-Modulated* / methods-
dc.subject.MESHReproducibility of Results-
dc.titleOpenKBP-Opt: an international and reproducible evaluation of 76 knowledge-based planning pipelines-
dc.typeArticle-
dc.contributor.collegeCollege of Medicine (의과대학)-
dc.contributor.departmentDept. of Radiation Oncology (방사선종양학교실)-
dc.contributor.googleauthorAaron Babier-
dc.contributor.googleauthorRafid Mahmood-
dc.contributor.googleauthorBinghao Zhang-
dc.contributor.googleauthorVictor G L Alves-
dc.contributor.googleauthorAna Maria Barragán-Montero-
dc.contributor.googleauthorJoel Beaudry-
dc.contributor.googleauthorCarlos E Cardenas-
dc.contributor.googleauthorYankui Chang-
dc.contributor.googleauthorZijie Chen-
dc.contributor.googleauthorJaehee Chun-
dc.contributor.googleauthorKelly Diaz-
dc.contributor.googleauthorHarold David Eraso-
dc.contributor.googleauthorErik Faustmann-
dc.contributor.googleauthorSibaji Gaj-
dc.contributor.googleauthorSkylar Gay-
dc.contributor.googleauthorMary Gronberg-
dc.contributor.googleauthorBingqi Guo-
dc.contributor.googleauthorJunjun He-
dc.contributor.googleauthorGerd Heilemann-
dc.contributor.googleauthorSanchit Hira-
dc.contributor.googleauthorYuliang Huang-
dc.contributor.googleauthorFuxin Ji-
dc.contributor.googleauthorDashan Jiang-
dc.contributor.googleauthorJean Carlo Jimenez Giraldo-
dc.contributor.googleauthorHoyeon Lee-
dc.contributor.googleauthorJun Lian-
dc.contributor.googleauthorShuolin Liu-
dc.contributor.googleauthorKeng-Chi Liu-
dc.contributor.googleauthorJosé Marrugo-
dc.contributor.googleauthorKentaro Miki-
dc.contributor.googleauthorKunio Nakamura-
dc.contributor.googleauthorTucker Netherton-
dc.contributor.googleauthorDan Nguyen-
dc.contributor.googleauthorHamidreza Nourzadeh-
dc.contributor.googleauthorAlexander F I Osman-
dc.contributor.googleauthorZhao Peng-
dc.contributor.googleauthorJosé Darío Quinto Muñoz-
dc.contributor.googleauthorChristian Ramsl-
dc.contributor.googleauthorDong Joo Rhee-
dc.contributor.googleauthorJuan David Rodriguez-
dc.contributor.googleauthorHongming Shan-
dc.contributor.googleauthorJeffrey V Siebers-
dc.contributor.googleauthorMumtaz H Soomro-
dc.contributor.googleauthorKay Sun-
dc.contributor.googleauthorAndrés Usuga Hoyos-
dc.contributor.googleauthorCarlos Valderrama-
dc.contributor.googleauthorRob Verbeek-
dc.contributor.googleauthorEnpei Wang-
dc.contributor.googleauthorSiri Willems-
dc.contributor.googleauthorQi Wu-
dc.contributor.googleauthorXuanang Xu-
dc.contributor.googleauthorSen Yang-
dc.contributor.googleauthorLulin Yuan-
dc.contributor.googleauthorSimeng Zhu-
dc.contributor.googleauthorLukas Zimmermann-
dc.contributor.googleauthorKevin L Moore-
dc.contributor.googleauthorThomas G Purdie-
dc.contributor.googleauthorAndrea L McNiven-
dc.contributor.googleauthorTimothy C Y Chan-
dc.identifier.doi10.1088/1361-6560/ac8044-
dc.relation.journalcodeJ02523-
dc.identifier.eissn1361-6560-
dc.identifier.pmid36093921-
dc.identifier.urlhttps://iopscience.iop.org/article/10.1088/1361-6560/ac8044-
dc.subject.keywordautomated planning-
dc.subject.keywordinverse optimization-
dc.subject.keywordinverse problem-
dc.subject.keywordknowledge-based planning-
dc.subject.keywordopen data-
dc.subject.keywordoptimization-
dc.subject.keywordradiotherapy-
dc.citation.volume67-
dc.citation.number18-
dc.citation.startPage185012-
dc.identifier.bibliographicCitationPHYSICS IN MEDICINE AND BIOLOGY, Vol.67(18) : 185012, 2022-09-
Appears in Collections:
1. College of Medicine (의과대학) > Dept. of Radiation Oncology (방사선종양학교실) > 1. Journal Papers

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