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A global analysis of Y-chromosomal haplotype diversity for 23 STR loci

Authors
 Josephine Purps  ;  Sabine Siegert  ;  Sascha Willuweit  ;  Marion Nagy  ;  Cíntia Alves  ;  Renato Salazar  ;  Sheila M T Angustia  ;  Lorna H Santos  ;  Katja Anslinger  ;  Birgit Bayer  ;  Qasim Ayub  ;  Wei Wei  ;  Yali Xue  ;  Chris Tyler-Smith  ;  Miriam Baeta Bafalluy  ;  Begoña Martínez-Jarreta  ;  Balazs Egyed  ;  Beate Balitzki  ;  Sibylle Tschumi  ;  David Ballard  ;  Denise Syndercombe Court  ;  Xinia Barrantes  ;  Gerhard Bäßler  ;  Tina Wiest  ;  Burkhard Berger  ;  Harald Niederstätter  ;  Walther Parson  ;  Carey Davis  ;  Bruce Budowle  ;  Helen Burri  ;  Urs Borer  ;  Christoph Koller  ;  Elizeu F Carvalho  ;  Patricia M Domingues  ;  Wafaa Takash Chamoun  ;  Michael D Coble  ;  Carolyn R Hill  ;  Daniel Corach  ;  Mariela Caputo  ;  Maria E D'Amato  ;  Sean Davison  ;  Ronny Decorte  ;  Maarten H D Larmuseau  ;  Claudio Ottoni  ;  Olga Rickards  ;  Di Lu  ;  Chengtao Jiang  ;  Tadeusz Dobosz  ;  Anna Jonkisz  ;  William E Frank  ;  Ivana Furac  ;  Christian Gehrig  ;  Vincent Castella  ;  Branka Grskovic  ;  Cordula Haas  ;  Jana Wobst  ;  Gavrilo Hadzic  ;  Katja Drobnic  ;  Katsuya Honda  ;  Yiping Hou  ;  Di Zhou  ;  Yan Li  ;  Shengping Hu  ;  Shenglan Chen  ;  Uta-Dorothee Immel  ;  Rüdiger Lessig  ;  Zlatko Jakovski  ;  Tanja Ilievska  ;  Anja E Klann  ;  Cristina Cano García  ;  Peter de Knijff  ;  Thirsa Kraaijenbrink  ;  Aikaterini Kondili  ;  Penelope Miniati  ;  Maria Vouropoulou  ;  Lejla Kovacevic  ;  Damir Marjanovic  ;  Iris Lindner  ;  Issam Mansour  ;  Mouayyad Al-Azem  ;  Ansar El Andari  ;  Miguel Marino  ;  Sandra Furfuro  ;  Laura Locarno  ;  Pablo Martín  ;  Gracia M Luque  ;  Antonio Alonso  ;  Luís Souto Miranda  ;  Helena Moreira  ;  Natsuko Mizuno  ;  Yasuki Iwashima  ;  Rodrigo S Moura Neto  ;  Tatiana L S Nogueira  ;  Rosane Silva  ;  Marina Nastainczyk-Wulf  ;  Jeanett Edelmann  ;  Michael Kohl  ;  Shengjie Nie  ;  Xianping Wang  ;  Baowen Cheng  ;  Carolina Núñez  ;  Marian Martínez de Pancorbo  ;  Jill K Olofsson  ;  Niels Morling  ;  Valerio Onofr  ;  Adriano Tagliabracci  ;  Horolma Pamjav  ;  Antonia Volgyi  ;  Gusztav Barany  ;  Ryszard Pawlowski  ;  Agnieszka Maciejewska  ;  Susi Pelotti  ;  Witold Pepinski  ;  Monica Abreu-Glowacka  ;  Christopher Phillips  ;  Jorge Cárdenas  ;  Danel Rey-Gonzalez  ;  Antonio Salas  ;  Francesca Brisighelli  ;  Cristian Capelli  ;  Ulises Toscanini  ;  Andrea Piccinini  ;  Marilidia Piglionica  ;  Stefania L Baldassarra  ;  Rafal Ploski  ;  Magdalena Konarzewska  ;  Emila Jastrzebska  ;  Carlo Robino  ;  Antti Sajantila  ;  Jukka U Palo  ;  Evelyn Guevara  ;  Jazelyn Salvador  ;  Maria Corazon De Ungria  ;  Jae Joseph Russell Rodriguez  ;  Ulrike Schmidt  ;  Nicola Schlauderer  ;  Pekka Saukko  ;  Peter M Schneider  ;  Miriam Sirker  ;  Kyoung-Jin Shin  ;  Yu Na Oh  ;  Iulia Skitsa  ;  Alexandra Ampati  ;  Tobi-Gail Smith  ;  Lina Solis de Calvit  ;  Vlastimil Stenzl  ;  Thomas Capal  ;  Andreas Tillmar  ;  Helena Nilsson  ;  Stefania Turrina  ;  Domenico De Leo  ;  Andrea Verzeletti  ;  Venusia Cortellini  ;  Jon H Wetton  ;  Gareth M Gwynne  ;  Mark A Jobling  ;  Martin R Whittle  ;  Denilce R Sumita  ;  Paulina Wolańska-Nowak  ;  Rita Y Y Yong  ;  Michael Krawczak  ;  Michael Nothnagel  ;  Lutz Roewer 
Citation
 FORENSIC SCIENCE INTERNATIONAL-GENETICS, Vol.12 : 12-23, 2014-09 
Journal Title
 FORENSIC SCIENCE INTERNATIONAL-GENETICS 
ISSN
 1872-4973 
Issue Date
2014-09
MeSH
Alleles ; Chromosomes, Human, Y* ; Forensic Genetics ; Haplotypes* ; Humans ; Microsatellite Repeats*
Keywords
AMOVA ; Database ; Discriminatory power ; Gene diversity ; Population structure
Abstract
In a worldwide collaborative effort, 19,630 Y-chromosomes were sampled from 129 different populations in 51 countries. These chromosomes were typed for 23 short-tandem repeat (STR) loci (DYS19, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS385ab, DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS635, GATAH4, DYS481, DYS533, DYS549, DYS570, DYS576, and DYS643) and using the PowerPlex Y23 System (PPY23, Promega Corporation, Madison, WI). Locus-specific allelic spectra of these markers were determined and a consistently high level of allelic diversity was observed. A considerable number of null, duplicate and off-ladder alleles were revealed. Standard single-locus and haplotype-based parameters were calculated and compared between subsets of Y-STR markers established for forensic casework. The PPY23 marker set provides substantially stronger discriminatory power than other available kits but at the same time reveals the same general patterns of population structure as other marker sets. A strong correlation was observed between the number of Y-STRs included in a marker set and some of the forensic parameters under study. Interestingly a weak but consistent trend toward smaller genetic distances resulting from larger numbers of markers became apparent.
Files in This Item:
T201406509.pdf Download
DOI
10.1016/j.fsigen.2014.04.008
Appears in Collections:
1. College of Medicine (의과대학) > Dept. of Forensic Medicine (법의학과) > 1. Journal Papers
Yonsei Authors
Shin, Kyoung Jin(신경진) ORCID logo https://orcid.org/0000-0002-1059-9665
URI
https://ir.ymlib.yonsei.ac.kr/handle/22282913/178465
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