| 2014 | A Systems Approach to Predict Oncometabolites via Context-Specific Genome-Scale Metabolic Networks
| PLOS GENETICS |
| 2019 | A therapeutic strategy for chemotherapy-resistant gastric cancer via destabilization of both β-catenin and ras
| CANCERS |
| 2018 | AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing | BIOINFORMATICS |
| 2015 | An AKT3-FOXG1-reelin network underlies defective migration in human focal malformations of cortical development
| NATURE MEDICINE |
| 2020 | An Improved, Assay Platform Agnostic, Absolute Single Sample Breast Cancer Subtype Classifier
| CANCERS |
| 2015 | Brain somatic mutations in MTOR cause focal cortical dysplasia type II leading to intractable epilepsy | NATURE MEDICINE |
| 2023 | Comprehensive benchmarking and guidelines of mosaic variant calling strategies
| NATURE METHODS |
| 2008 | Computational identification of significantly regulated metabolic reactions by integration of data on enzyme activity and gene expression
| BMB REPORTS |
| 2015 | Context-based resolution of semantic conflicts in biological pathways
| BMC MEDICAL INFORMATICS AND DECISION MAKING |
| 2023 | Copy number aberrations in circulating tumor DNA enables prognosis prediction and molecular characterization of breast cancer | JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE |
| 2020 | Cross-species oncogenic signatures of breast cancer in canine mammary tumors
| NATURE COMMUNICATIONS |
| 2016 | Establishment and characterisation of patient-derived xenografts as paraclinical models for gastric cancer
| SCIENTIFIC REPORTS |
| 2022 | Establishment of reference standards for multifaceted mosaic variant analysis
| SCIENTIFIC DATA |
| 2016 | Exome sequencing reveals recurrent REV3L mutations in cisplatin-resistant squamous cell carcinoma of head and neck
| SCIENTIFIC REPORTS |
| 2022 | Genome-wide association study identifies TNFSF15 associated with childhood asthma | ALLERGY |
| 2021 | Genomic landscape of extraordinary responses in metastatic breast cancer
| COMMUNICATIONS BIOLOGY |
| 2015 | Identification of genomic features in the classification of loss- and gain-of-function mutation
| BMC MEDICAL INFORMATICS AND DECISION MAKING |
| 2017 | In Silico Simulation of Signal Cascades in Biomedical Networks Based on the Production Rule System | Lecture Notes in Computer Science |
| 2018 | Neopepsee: accurate genome-level prediction of neoantigens by harnessing sequence and amino acid immunogenicity information | ANNALS OF ONCOLOGY |
| 2018 | Palmitate and minimally-modified low-density lipoprotein cooperatively promote inflammatory responses in macrophages
| PLOS ONE |
| 2023 | Personalized Biomarker-Based Umbrella Trial for Patients With Recurrent or Metastatic Head and Neck Squamous Cell Carcinoma: KCSG HN 15-16 TRIUMPH Trial | JOURNAL OF CLINICAL ONCOLOGY |
| 2016 | Pilot Study of a Next-Generation Sequencing-Based Targeted Anticancer Therapy in Refractory Solid Tumors at a Korean Institution
| PLOS ONE |
| 2015 | SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data | BIOINFORMATICS |
| 2017 | Somatic mutation driven codon transition bias in human cancer
| SCIENTIFIC REPORTS |
| 2017 | Somatic Mutations in TSC1 and TSC2 Cause Focal Cortical Dysplasia | AMERICAN JOURNAL OF HUMAN GENETICS |
| 2018 | Targeted gene panel and genotype-phenotype correlation in children with developmental and epileptic encephalopathy | EPILEPSY RESEARCH |
| 2016 | Vecuum: identification and filtration of false somatic variants caused by recombinant vector contamination | BIOINFORMATICS |
